Publications

Journal publications

Continuous glucose monitoring and intrapersonal variability in fasting glucose
Smadar Shilo, Ayya Keshet, Hagai Rossman, Anastasia Godneva, Yeela Talmor-Barkan, Yaron Aviv, Eran Segal.
Nature Medicine 2024 [[paper] (https://www.nature.com/articles/s41591-024-02908-9)]

**Genome-wide association studies and polygenic risk score phenome-wide association studies across complex phenotypes in the human phenotype project*
Zachary Levine, Iris Kalka, Dmitry Kolobkov, Hagai Rossman, Anastasia Godneva, Smadar Shilo, Ayya Keshet, Daphna Weissglas-Volkov, Tal Shor, Alon Diament, Yeela Talmor-Barkan, Yaron Aviv, Tom Sharon, Adina Weinberger, Eran Segal.
Med 2024 [[paper] (https://www.cell.com/med/abstract/S2666-6340(23)00400-2)]

CGMap: Characterizing continuous glucose monitor data in thousands of non-diabetic individuals
Ayya Keshet, Smadar Shilo, Anastasia Godneva, Yeela Talmor-Barkan, Yaron Aviv, Eran Segal, Hagai Rossman.
Cell Metabolism 2023 [paper]

Wearable and digital devices to monitor and treat metabolic diseases
Ayya Keshet, Lee Reicher, Noam Bar, Eran Segal.
Nature Metabolism 2023 [[paper] (https://www.nature.com/articles/s42255-023-00778-y)]

PyMSM: Python package for Competing Risks and Multi-State models for Survival Data
Hagai Rossman, Ayya Keshet, Malka Gorfine.
Journal of Open Source Software 2022 [paper] [code]

Estimating the effect of cesarean delivery on long term childhood health across two countries
Ayya Keshet, Hagai Rossman, Smadar Shilo, Shiri Barbash-Hazan, Guy Amit, Maytal Bivas-Benita, Chen Yanover, Irena Girshovitz, Pinchas Akiva, Avi Ben-Haroush, Eran Hadar, Arnon Wiznitzer, Eran Segal.
[paper] [code]

A framework for identifying regional outbreak and spread of COVID-19 from one-minute population-wide surveys
Hagai Rossman, Ayya Keshet, Smadar Shilo, Amir Gavrieli, Tal Bauman, Ori Cohen, Ran Balicer, Benjamin Geiger, Yuval Dor, Eran Segal.
Nature Medicine 2020 [paper]

Longitudinal symptom dynamics of COVID-19 infection
Barak Mizrahi, Smadar Shilo, Hagai Rossman, Nir Kalkstein, Karni Marcus, Yael Barer, Ayya Keshet, Na’ama Shamir-Stein, Varda Shalev, Anat Ekka Zohar, Gabriel Chodick, Eran Segal.
Nature Communications 2020 [paper] [blog]

Building an International Consortium for Tracking Coronavirus Health Status
Segal et. al.
Nature Medicine 2020 [paper]

A Prediction Model to Prioritize Individuals for a SARS-CoV-2 Test Built from National Symptom Surveys
Saar Shoer, Tal Karady, Ayya Keshet, Smadar Shilo, Hagai Rossman, Amir Gavrieli, Tomer Meir, Amit Lavon, Dmitry Kolobkov, Iris Kalka, Anastasia Godneva, Ori Cohen, Adam Kariv, Ori Hoch, Mushon Zer-Aviv, Noam Castel, Anat Ekka Zohar, Angela Irony, Benjamin Geiger, Dorit Hizi, Varda Shalev, Ran Balicer, Eran Segal.
Med 2020 [paper]

Cohort profile: 10K - a large-scale prospective longitudinal study in Israel
Smadar Shilo, Noam Bar, Ayya Keshet, Yeela Talmor-Barkan, Hagai Rossman, Anastasia Godneva, Yaron Aviv, Yochai Edlitz, Lee Reicher, Dmitry Kolobkov, Bat Chen Wolf, Maya Lotan-Pompan, Kohava Levi, Ori Cohen, Hila Saranga, Adina Weinberger, Eran Segal.
European Journal of Epidemiology 2021 [paper]

Stress-related emotional and behavioural impact following the first COVID-19 outbreak peak
Asaf Benjamin, Yael Kuperman, Noa Eren, Ron Rotkopf, Maya Amitai, Hagai Rossman, Smadar Shilo, Tomer Meir, Ayya Keshet, Orit Nuttman-Shwartz, Eran Segal & Alon Chen.
Molecular Psychiatry 2021 [paper]

Anosmia and other SARS-CoV-2 positive test-associated symptoms, across three national, digital surveillance platforms as the COVID-19 pandemic and response unfolded: an observation study
Sudre, Keshet, et. al.
Lancet Digital Health 2021 [paper]

A-to-I RNA Editing Affects lncRNAs Expression after Heat Shock
Roni Haas, Nabeel S. Ganem, Ayya Keshet, Angela Orlov, Alla Fishman, Ayelet T. Lamm.
Genes 2018 [[paper] (https://www.mdpi.com/2073-4425/9/12/627)]

Preprints

The effect of a national lockdown in response to COVID-19 pandemic on the prevalence of clinical symptoms in the population
Ayya Keshet, Amir Gavrieli, Hagai Rossman, Smadar Shilo, Tomer Meir, Tal Karady, Amit Lavon, Dmitry Kolobkov, Iris Kalka, Saar Shoer, Anastasia Godneva, Ori Cohen, Adam Kariv, Ori Hoch, Mushon Zer-Aviv, Noam Castel, Anat Ekka Zohar, Angela Irony, Benjamin Geiger, Yuval Dor, Dorit Hizi, Ran Balicer, Varda Shalev, Eran Segal.
[preprint]

FrackyFrac: A Standalone UniFrac Calculator
Amit Lavon, Smadar Shilo, Ayya Keshet, Eran Segal.
[[preprint] (https://arxiv.org/abs/2404.11087)]

Conference & poster presentations

A Multimodal Dataset of 21,412 Recorded Nights for Sleep and Respiratory Research  Alon Diament, Maria Gorodetski, Adam Jankelow, Ayya Keshet, Tal Shor, Daphna Weissglas-Volkov, Hagai Rossman, Eran Segal.
Neural Information Processing Systems (NeurIPS) Machine Learning in Health workshop, 2023

Leveraging nationwide data and domain expertise to infer causal effect of cesarean section birth on long term pediatric health
Ayya Keshet, Hagai Rossman, Shiri Hazan, Smadar Shilo, Eran Hadar, Avi Ben-Haroush, Arnon Wiznitzer, Eran Segal.
Machine Learning in Real Life workshop ICLR 2020

Rapid deployment of a nationwide, one-minute, online symtpoms survey during the outbreak and spread of COVID-19 - framework and application Keshet et. al. ICML 2020 Workshop, Healthcare Systems, Population Health, and the Role of Health-Tech

Who Should We Test for COVID-19? A Triage Model Built from National Symptom Surveys (Spotlight) Shoer et. al. ICML 2020 Workshop, Healthcare Systems, Population Health, and the Role of Health-Tech